AFQ.tasks.tractography

Module Contents

Functions

export_seed_mask(subses_dict, dwi_affine, tracking_params)

export_stop_mask(subses_dict, dwi_affine, tracking_params)

export_stop_mask_pft(pve_wm, pve_gm, pve_csf)

streamlines(subses_dict, data_imap, seed_file, stop_file, tracking_params)

custom_tractography(custom_tract_file)

get_tractography_plan(custom_tract_file, tracking_params)

Attributes

outputs

AFQ.tasks.tractography.outputs[source]
AFQ.tasks.tractography.export_seed_mask(subses_dict, dwi_affine, tracking_params)[source]
AFQ.tasks.tractography.export_stop_mask(subses_dict, dwi_affine, tracking_params)[source]
AFQ.tasks.tractography.export_stop_mask_pft(pve_wm, pve_gm, pve_csf)[source]
AFQ.tasks.tractography.streamlines(subses_dict, data_imap, seed_file, stop_file, tracking_params)[source]
AFQ.tasks.tractography.custom_tractography(custom_tract_file)[source]
AFQ.tasks.tractography.get_tractography_plan(custom_tract_file, tracking_params)[source]