AFQ.models.fwdti#
Module Contents#
Functions#
|
Fit the free water DTI model [1]_, save files with derived maps |
- AFQ.models.fwdti.fit_fwdti(data_files, bval_files, bvec_files, mask=None, out_dir=None, b0_threshold=50)[source]#
Fit the free water DTI model [1]_, save files with derived maps
- Parameters
- data_filesstr or list
Files containing DWI data. If this is a str, that’s the full path to a single file. If it’s a list, each entry is a full path.
- bval_filesstr or list
Equivalent to data_files.
- bvec_filesstr or list
Equivalent to data_files.
- maskndarray, optional
Binary mask, set to True or 1 in voxels to be processed. Default: Process all voxels.
- out_dirstr, optional
A full path to a directory to store the maps that get computed. Default: maps get stored in the same directory as the last DWI file in data_files.
- b0_thresholdfloat
- Returns
- file_pathsa dict with the derived maps that were computed and full-paths
- to the files containing these maps.